| Protein ZmEREB49 | |
|---|---|
|
ZmEREB49 is a protein in the AP2/ERF-AP2 family.
|
|
| Information | |
| TF Name: | ZmEREB49 |
| Species: | Maize |
| TF Family: | AP2/ERF-AP2 |
| Gene Name(Synonym): | ZmERFAP2_48 |
| Uniprot ID: | K7UX20 |
| Subgenome: | 2 |
Protein ZmEREB49
ZmEREB49 is a protein in the AP2/ERF-AP2 family.
| Overview of domains present in v5 transcripts | ||
|---|---|---|
| PF00847 | PF02362 | |
| Zm00001eb342850_T001 |  | |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d009468 | DAPseq |  |
sequence | fimo | position |
| Zm00001d009468 | DAPseq |  |
sequence | fimo | position |
| Zm00001d009468 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d009468 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmEREB49 is the regulator
Interactions where ZmEREB49 is the target
Expand
Zm00001eb342850_T001 from maize genome v5
Amino Acid Sequence
Copy to clipboard
MDSTSCLLDDASSGASTGKNKPAPVPAPAAVTGKPLQRVGSSGASAVMDAAEPGAEADSDGARRAPGGVGGKLPSSKYKG
VVPQPNGRWGAQIYERHQRVWLGTFTGEAEAARAYDVAAQRFRGRDAVTNFRPLAESDLDPDAAAELRFLASRSKAEVVD
MLRKHTYGEELAQNRRAFAAAAASLASPQLPPAKNTSPAAAREHLFDKTVTPSDVGKLNRLVIPKQHAERHFPLRRVQGG
RAPILSFEDAAGKAWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRSAAAGRQLFIDCKLRPKAVRLFGVDLL
TEPPRSAAAVAQPEPEQEEIAVSKNKRARDAIAASATPVHIAFKKQRVDVALTTT
MDSTSCLLDDASSGASTGKNKPAPVPAPAAVTGKPLQRVGSSGASAVMDAAEPGAEADSDGARRAPGGVGGKLPSSKYKG
VVPQPNGRWGAQIYERHQRVWLGTFTGEAEAARAYDVAAQRFRGRDAVTNFRPLAESDLDPDAAAELRFLASRSKAEVVD
MLRKHTYGEELAQNRRAFAAAAASLASPQLPPAKNTSPAAAREHLFDKTVTPSDVGKLNRLVIPKQHAERHFPLRRVQGG
RAPILSFEDAAGKAWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRSAAAGRQLFIDCKLRPKAVRLFGVDLL
TEPPRSAAAVAQPEPEQEEIAVSKNKRARDAIAASATPVHIAFKKQRVDVALTTT
MDSTSCLLDDASSGASTGKNKPAPVPAPAAVTGKPLQRVGSSGASAVMDAAEPGAEADSDGARRAPGGVGGKLPSSKYKG
VVPQPNGRWGAQIYERHQRVWLGTFTGEAEAARAYDVAAQRFRGRDAVTNFRPLAESDLDPDAAAELRFLASRSKAEVVD
MLRKHTYGEELAQNRRAFAAAAASLASPQLPPAKNTSPAAAREHLFDKTVTPSDVGKLNRLVIPKQHAERHFPLRRVQGG
RAPILSFEDAAGKAWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRSAAAGRQLFIDCKLRPKAVRLFGVDLL
TEPPRSAAAVAQPEPEQEEIAVSKNKRARDAIAASATPVHIAFKKQRVDVALTTT
MDSTSCLLDDASSGASTGKNKPAPVPAPAAVTGKPLQRVGSSGASAVMDAAEPGAEADSDGARRAPGGVGGKLPSSKYKG
VVPQPNGRWGAQIYERHQRVWLGTFTGEAEAARAYDVAAQRFRGRDAVTNFRPLAESDLDPDAAAELRFLASRSKAEVVD
MLRKHTYGEELAQNRRAFAAAAASLASPQLPPAKNTSPAAAREHLFDKTVTPSDVGKLNRLVIPKQHAERHFPLRRVQGG
RAPILSFEDAAGKAWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRSAAAGRQLFIDCKLRPKAVRLFGVDLL
TEPPRSAAAVAQPEPEQEEIAVSKNKRARDAIAASATPVHIAFKKQRVDVALTTT
MDSTSCLLDDASSGASTGKNKPAPVPAPAAVTGKPLQRVGSSGASAVMDAAEPGAEADSDGARRAPGGVGGKLPSSKYKG
VVPQPNGRWGAQIYERHQRVWLGTFTGEAEAARAYDVAAQRFRGRDAVTNFRPLAESDLDPDAAAELRFLASRSKAEVVD
MLRKHTYGEELAQNRRAFAAAAASLASPQLPPAKNTSPAAAREHLFDKTVTPSDVGKLNRLVIPKQHAERHFPLRRVQGG
RAPILSFEDAAGKAWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRSAAAGRQLFIDCKLRPKAVRLFGVDLL
TEPPRSAAAVAQPEPEQEEIAVSKNKRARDAIAASATPVHIAFKKQRVDVALTTT
MDSTSCLLDDASSGASTGKNKPAPVPAPAAVTGKPLQRVGSSGASAVMDAAEPGAEADSDGARRAPGGVGGKLPSSKYKG
VVPQPNGRWGAQIYERHQRVWLGTFTGEAEAARAYDVAAQRFRGRDAVTNFRPLAESDLDPDAAAELRFLASRSKAEVVD
MLRKHTYGEELAQNRRAFAAAAASLASPQLPPAKNTSPAAAREHLFDKTVTPSDVGKLNRLVIPKQHAERHFPLRRVQGG
RAPILSFEDAAGKAWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRSAAAGRQLFIDCKLRPKAVRLFGVDLL
TEPPRSAAAVAQPEPEQEEIAVSKNKRARDAIAASATPVHIAFKKQRVDVALTTT
MDSTSCLLDDASSGASTGKNKPAPVPAPAAVTGKPLQRVGSSGASAVMDAAEPGAEADSDGARRAPGGVGGKLPSSKYKG
VVPQPNGRWGAQIYERHQRVWLGTFTGEAEAARAYDVAAQRFRGRDAVTNFRPLAESDLDPDAAAELRFLASRSKAEVVD
MLRKHTYGEELAQNRRAFAAAAASLASPQLPPAKNTSPAAAREHLFDKTVTPSDVGKLNRLVIPKQHAERHFPLRRVQGG
RAPILSFEDAAGKAWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRSAAAGRQLFIDCKLRPKAVRLFGVDLL
TEPPRSAAAVAQPEPEQEEIAVSKNKRARDAIAASATPVHIAFKKQRVDVALTTT
MDSTSCLLDDASSGASTGKNKPAPVPAPAAVTGKPLQRVGSSGASAVMDAAEPGAEADSDGARRAPGGVGGKLPSSKYKG
VVPQPNGRWGAQIYERHQRVWLGTFTGEAEAARAYDVAAQRFRGRDAVTNFRPLAESDLDPDAAAELRFLASRSKAEVVD
MLRKHTYGEELAQNRRAFAAAAASLASPQLPPAKNTSPAAAREHLFDKTVTPSDVGKLNRLVIPKQHAERHFPLRRVQGG
RAPILSFEDAAGKAWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRSAAAGRQLFIDCKLRPKAVRLFGVDLL
TEPPRSAAAVAQPEPEQEEIAVSKNKRARDAIAASATPVHIAFKKQRVDVALTTT
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF00847 |
|
| PF00847 |
|
| PF02362 |
|
| PF00847 |
|
| Hover here to show all domains | |
Nucleotide Sequence
Copy to clipboard
Expand
TTCACTTGACCTCCCCCACCCCGGC...
TTCACTTGACCTCCCCCACCCCGGCCCATTTCCGCTCCTTGAACTGAATCTTCCCCAGAGGCCAGACTGCCAGAGCATATATCTCTCTTTGGGTCGTTGGGTGTAGTAGTGATCGGATGGACAGCACAAGCTGCCTGCTGGACGACGCGAGCAGCGGCGCGTCCACGGGCAAAAATAAGCCGGCCCCGGTCCCGGCTCCGGCTGCGGTGACCGGCAAACCGCTACAGCGCGTGGGCAGCAGCGGCGCCAGCGCGGTGATGGACGCGGCGGAGCCGGGCGCGGAGGCGGACTCGGACGGCGCCAGGCGTGCCCCAGGAGGCGTCGGCGGGAAGCTGCCGTCGTCCAAGTACAAGGGCGTGGTGCCGCAGCCCAACGGGCGGTGGGGCGCGCAGATCTACGAGCGCCACCAGCGCGTGTGGCTCGGCACGTTCACGGGCGAGGCCGAGGCCGCGCGCGCCTACGACGTGGCCGCGCAGCGGTTCCGGGGGCGCGACGCCGTCACCAACTTCCGCCCGCTCGCGGAGTCGGACTTGGACCCGGACGCCGCCGCCGAGCTCCGGTTCCTCGCGTCCCGGTCCAAGGCCGAGGTCGTCGACATGCTCCGCAAGCACACCTACGGCGAGGAGCTCGCGCAGAACAGGCGCGCCTTCGCCGCTGCGGCGGCGTCCCTGGCCTCGCCGCAGCTGCCGCCGGCCAAGAACACTAGCCCGGCGGCGGCGCGCGAGCACCTCTTCGACAAGACGGTGACGCCGAGCGACGTGGGGAAGCTGAACCGGCTGGTGATACCGAAGCAGCACGCGGAGAGGCACTTCCCGCTGCGGCGAGTGCAAGGCGGTCGTGCTCCGATCCTCAGCTTCGAGGACGCCGCCGGGAAGGCGTGGAGGTTCCGGTACTCGTACTGGAACAGCAGCCAGAGCTACGTGCTGACCAAGGGGTGGAGCCGCTTCGTCAAGGAGAAGGGCCTCCACGCCGGCGACGCCGTCGGGTTCTACCGCTCGGCCGCCGCCGGCAGGCAGCTCTTCATCGACTGCAAGCTCCGGCCCAAGGCGGTGAGGCTTTTCGGCGTGGACTTGCTCACTGAGCCGCCGAGGTCAGCAGCAGCAGTGGCGCAGCCGGAGCCGGAGCAGGAGGAGATCGCCGTGTCGAAGAACAAGAGAGCTAGGGACGCCATCGCCGCGTCTGCTACTCCAGTACACATTGCTTTCAAGAAGCAACGCGTAGACGTCGCGCTGACGACGACCTAGCTATAGCTGACGATTTTTTTTTTGCTCTCCACAAACCCTCCTCTTGGTTAAATTCGCTCGCTCGTATTGGATGATATACAAGAATACAAGATGCATGGTGGTCGCTAGCTAGCTAAGTAGCTTTTGGCGCGCGCACCGATCTCATCGTTCATTTATG
GRMZM2G159592_T01 from maize genome v3
Amino Acid Sequence
Copy to clipboard
MDSTSCLLDDASSGASTGKNKPAPVPAPAAVTGKPLQRVGSSGASAVMDAAEPGAEADSDGARRAPGGVGGKLPSSKYKG
VVPQPNGRWGAQIYERHQRVWLGTFTGEAEAARAYDVAAQRFRGRDAVTNFRPLAESDLDPDAAAELRFLASRSKAEVVD
MLRKHTYGEELAQNRRAFAAAAASLASPQLPPAKNTSPAAAREHLFDKTVTPSDVGKLNRLVIPKQHAERHFPLRRVQGG
RAPILSFEDAAGKAWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRSAAAGRQLFIDCKLRPKAVRLFGVDLL
TEPPRSAAAVAQPEPEQEEIAVSKNKRARDAIAASATPVHIAFKKQRVDVALTTT
Nucleotide Sequence
Copy to clipboard
Expand
ACACACACCTTTCACTTGACCTCCC...
ACACACACCTTTCACTTGACCTCCCCCACCCCGGCCCATTTCCGCTCCTTGAACTGAATCTTCCCCAGAGGCCAGACTGCCAGAGCATATATCTCTCTTTGGGTCGTTGGGTGTAGTAGTGATCGGATGGACAGCACAAGCTGCCTGCTGGACGACGCGAGCAGCGGCGCGTCCACGGGCAAAAATAAGCCGGCCCCGGTCCCGGCTCCGGCTGCGGTGACCGGCAAACCGCTACAGCGCGTGGGCAGCAGCGGCGCCAGCGCGGTGATGGACGCGGCGGAGCCGGGCGCGGAGGCGGACTCGGACGGCGCCAGGCGTGCCCCAGGAGGCGTCGGCGGGAAGCTGCCGTCGTCCAAGTACAAGGGCGTGGTGCCGCAGCCCAACGGGCGGTGGGGCGCGCAGATCTACGAGCGCCACCAGCGCGTGTGGCTCGGCACGTTCACGGGCGAGGCCGAGGCCGCGCGCGCCTACGACGTGGCCGCGCAGCGGTTCCGGGGGCGCGACGCCGTCACCAACTTCCGCCCGCTCGCGGAGTCGGACTTGGACCCGGACGCCGCCGCCGAGCTCCGGTTCCTCGCGTCCCGGTCCAAGGCCGAGGTCGTCGACATGCTCCGCAAGCACACCTACGGCGAGGAGCTCGCGCAGAACAGGCGCGCCTTCGCCGCTGCGGCGGCGTCCCTGGCCTCGCCGCAGCTGCCGCCGGCCAAGAACACTAGCCCGGCGGCGGCGCGCGAGCACCTCTTCGACAAGACGGTGACGCCGAGCGACGTGGGGAAGCTGAACCGGCTGGTGATACCGAAGCAGCACGCGGAGAGGCACTTCCCGCTGCGGCGAGTGCAAGGCGGTCGTGCTCCGATCCTCAGCTTCGAGGACGCCGCCGGGAAGGCGTGGAGGTTCCGGTACTCGTACTGGAACAGCAGCCAGAGCTACGTGCTGACCAAGGGGTGGAGCCGCTTCGTCAAGGAGAAGGGCCTCCACGCCGGCGACGCCGTCGGGTTCTACCGCTCGGCCGCCGCCGGCAGGCAGCTCTTCATCGACTGCAAGCTCCGGCCCAAGGCGGTGAGGCTTTTCGGCGTGGACTTGCTCACTGAGCCGCCGAGGTCAGCAGCAGCAGTGGCGCAGCCGGAGCCGGAGCAGGAGGAGATCGCCGTGTCGAAGAACAAGAGAGCTAGGGACGCCATCGCCGCGTCTGCTACTCCAGTACACATTGCTTTCAAGAAGCAACGCGTAGACGTCGCGCTGACGACGACCTAGCTATAGCTGACGATTTTTTTTTTGCTCTCCACAAACCCTCCTCTTGGTTAAATTCGCTCGCTCGTATTGGATGATATACAAGAATACAAGATGCATGGTGGTCGCTAGCTAGCTAAGTAGCTTT
Zm00001d009468_T001 from maize genome v4
Amino Acid Sequence
Copy to clipboard
MDSTSCLLDDASSGASTGKNKPAPVPAPAAVTGKPLQRVGSSGASAVMDAAEPGAEADSDGARRAPGGVGGKLPSSKYKG
VVPQPNGRWGAQIYERHQRVWLGTFTGEAEAARAYDVAAQRFRGRDAVTNFRPLAESDLDPDAAAELRFLASRSKAEVVD
MLRKHTYGEELAQNRRAFAAAAASLASPQLPPAKNTSPAAAREHLFDKTVTPSDVGKLNRLVIPKQHAERHFPLRRVQGG
RAPILSFEDAAGKAWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRSAAAGRQLFIDCKLRPKAVRLFGVDLL
TEPPRSAAAVAQPEPEQEEIAVSKNKRARDAIAASATPVHIAFKKQRVDVALTTT
Nucleotide Sequence
Copy to clipboard
Expand
ATGGACAGCACAAGCTGCCTGCTGG...
ATGGACAGCACAAGCTGCCTGCTGGACGACGCGAGCAGCGGCGCGTCCACGGGCAAAAATAAGCCGGCCCCGGTCCCGGCTCCGGCTGCGGTGACCGGCAAACCGCTACAGCGCGTGGGCAGCAGCGGCGCCAGCGCGGTGATGGACGCGGCGGAGCCGGGCGCGGAGGCGGACTCGGACGGCGCCAGGCGTGCCCCAGGAGGCGTCGGCGGGAAGCTGCCGTCGTCCAAGTACAAGGGCGTGGTGCCGCAGCCCAACGGGCGGTGGGGCGCGCAGATCTACGAGCGCCACCAGCGCGTGTGGCTCGGCACGTTCACGGGCGAGGCCGAGGCCGCGCGCGCCTACGACGTGGCCGCGCAGCGGTTCCGGGGGCGCGACGCCGTCACCAACTTCCGCCCGCTCGCGGAGTCGGACTTGGACCCGGACGCCGCCGCCGAGCTCCGGTTCCTCGCGTCCCGGTCCAAGGCCGAGGTCGTCGACATGCTCCGCAAGCACACCTACGGCGAGGAGCTCGCGCAGAACAGGCGCGCCTTCGCCGCTGCGGCGGCGTCCCTGGCCTCGCCGCAGCTGCCGCCGGCCAAGAACACTAGCCCGGCGGCGGCGCGCGAGCACCTCTTCGACAAGACGGTGACGCCGAGCGACGTGGGGAAGCTGAACCGGCTGGTGATACCGAAGCAGCACGCGGAGAGGCACTTCCCGCTGCGGCGAGTGCAAGGCGGTCGTGCTCCGATCCTCAGCTTCGAGGACGCCGCCGGGAAGGCGTGGAGGTTCCGGTACTCGTACTGGAACAGCAGCCAGAGCTACGTGCTGACCAAGGGGTGGAGCCGCTTCGTCAAGGAGAAGGGCCTCCACGCCGGCGACGCCGTCGGGTTCTACCGCTCGGCCGCCGCCGGCAGGCAGCTCTTCATCGACTGCAAGCTCCGGCCCAAGGCGGTGAGGCTTTTCGGCGTGGACTTGCTCACTGAGCCGCCGAGGTCAGCAGCAGCAGTGGCGCAGCCGGAGCCGGAGCAGGAGGAGATCGCCGTGTCGAAGAACAAGAGAGCTAGGGACGCCATCGCCGCGTCTGCTACTCCAGTACACATTGCTTTCAAGAAGCAACGCGTAGACGTCGCGCTGACGACGACCTAG
Copyright © 2023 Grassius.org | Last updated: 2023-06-26